Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs34662244 chr6:28073881 G/A 1.77E-8 286 25.6 29.43 9.77 KM Plot
KIRP rs34676049 chr6:28453618 T/G 8.15E-9 281 25.58 29.77 9.77 KM Plot
KIRP rs34691223 chr6:28258208 C/A 0 289 25.6 26.58 9.38 KM Plot
KIRP rs34706883 chr6:27805255 A/C 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs34718920 chr6:27783941 C/T 1.21E-8 289 25.63 26.37 9.77 KM Plot
KIRP rs34724414 chr6:28619353 A/G 2.46E-8 282 25.57 28.02 9.77 KM Plot
KIRP rs34765154 chr6:28130450 G/A 1.58E-8 287 25.58 29.43 9.77 KM Plot
KIRP rs34788973 chr6:27879200 C/A 1.65E-8 285 25.58 29.43 9.77 KM Plot
KIRP rs34802546 chr15:41921581 G/A 0.000112 286 26.77 22.47 17.13 KM Plot
KIRP rs34832585 chr6:28150878 C/T 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs34832871 chr5:176655929 A/G 2.51E-8 286 25.93 25.7 4.93 KM Plot
KIRP rs34850152 chr16:90058161 T/TG 0.000164 287 24.73 35.32 10.23 KM Plot
KIRP rs34871267 chr6:28364232 G/A 2.0E-8 284 25.57 26.38 9.77 KM Plot
KIRP rs34878706 chr16:89723870 G/A 3.66E-8 279 26.28 25.6 9.77 KM Plot
KIRP rs34878803 chr6:28250179 T/C 0 289 25.6 26.58 9.38 KM Plot